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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924283.1_cds_XP_016472645.1_64863
CDS Infomation

[gene=LOC107794647] [db_xref=GeneID:107794647] [protein=aspartic proteinase nepenthesin-2-like isoform X1] [protein_id=XP_016472645.1] [location=complement(join(94465..94618,94855..96122))] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCCCCTCCTCTCCTCCTTTTTCTCCCTATCCTTTCTCTCCTGTTTCCC
TTCATTTCTTCATCAAACTCCCCCACAACAATCCCTCTCTCACTTTTCAACACCAATCCA
AATCAAGACTTTTACCAAAAGCTCACGCATTTAGCTTCTGTTTCCTTAGCTAGAGCACAT
CATATCAAGAATTCCCAAGATTCTTCTGTTTCCAAAATCCCTTTATACCCTCATAGCTAT
GGAGGTTACTCAATTACTCTTGGATTTGGTACTCCTCCTCAAAAAATGTCTTTTATTATG
GACACTGGCAGTAGCTTTGTTTGGTTCCCATGTACTAAAAAATACCAATGTTCCAAATGT
CCTATTTCTTCACAAAATATTCCTACATTTGTTCCCAAGTTGTCAACTTCTGCTAAGGTT
GTTGGATGTTTGAATCCAAAATGTAGTTGGATTCACCCCAAAACCAATCCAAAATCTCGT
TGCCAAGATTGTCAATCACTCAACCCATCAAATTGCAAACAGATTTGTCCACCTTATATG
ATTCTATATGGTGCAGGTTCCACAGGTGGACTTGGCCTAGTTGAAACACTAGACTTACCT
AACAAGAAAATACCAAATTTTCTTGTTGGTTGTTCTTTATTTTCATCTCAACAACCGGCT
GGAATCGCGGGTTTTGGTAGGGGATTTTCATCATTGCCAAATCAATTAGGTGCCAAGAAA
TTGTCTTATTGTCTTGTGTCTCATAGATTTGATGACACTAGCAAAAGTAGCATGCTTGTT
TTGGATAGTTCTAATGAAAAGTCAGCAAATTTGAGCCATACTCCTTTGCTGAAAAATCCA
GTGGTTGTTGGAAGAAATGCATTATTAGAGTACTATTATGTTGGCCTAAGAAAAATCACA
GTTGGTGGGCAGAAAGTGAAAATACCATATCATTATTTGACACCAAATTCCAAAGGGGAT
GGTGGGACTATAGTGGATTCGGGGACAACTTTCACATTCTTGAATCATGGAATTTTTGAG
CCAGTGATGAGTGCATTTGTGAACCAAGTAAAGGGGTTTTCAAGAATTGAGAAAATTGAA
AAATTGACAGGTTTAAGGCCTTGTTTTAATGTTTCAGGGCATAAAACAGTGTCTTTGCCA
GAGCTGAAGTTTCATTTCAAAGGTGGTGCAGAAATGGCATTGCCATTGGCTAATTACTTC
TCTATAGTTGAGGAAAATGATGTGATTTGTCTGACTATGGTGGAGACCTATTGGTGGAAG
AGCAAGAGGAACAGTGGAAGAAGTAGGTTGCTATGTTTTTTTGAAATGCAAAGATTCCTC
GAAAATAGTCTTTCTATCTTTATAAAATATTACTATTTTTCGGATCCCATTTATAAGATT
GCGCTAAGAGTGTTTGTTGGCGTAGCGGAAGAAGCAGGCTGA

Peptide Sequence

PEP ID

XP_016472645.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-2-like isoform X1 [Nicotiana tabacum]
Sequence

MASSSPPLLLFLPILSLLFPFISSSNSPTTIPLSLFNTNPNQDFYQKLTHLASVSLARAH
HIKNSQDSSVSKIPLYPHSYGGYSITLGFGTPPQKMSFIMDTGSSFVWFPCTKKYQCSKC
PISSQNIPTFVPKLSTSAKVVGCLNPKCSWIHPKTNPKSRCQDCQSLNPSNCKQICPPYM
ILYGAGSTGGLGLVETLDLPNKKIPNFLVGCSLFSSQQPAGIAGFGRGFSSLPNQLGAKK
LSYCLVSHRFDDTSKSSMLVLDSSNEKSANLSHTPLLKNPVVVGRNALLEYYYVGLRKIT
VGGQKVKIPYHYLTPNSKGDGGTIVDSGTTFTFLNHGIFEPVMSAFVNQVKGFSRIEKIE
KLTGLRPCFNVSGHKTVSLPELKFHFKGGAEMALPLANYFSIVEENDVICLTMVETYWWK
SKRNSGRSRLLCFFEMQRFLENSLSIFIKYYYFSDPIYKIALRVFVGVAEEAG

Transcript Sequence

Gene sequence data has not been registered.